[gmx-users] gromacs build options

Mark Abraham mark.j.abraham at gmail.com
Sun Oct 9 13:06:19 CEST 2016


Hi,

Great. But CMAKE_INSTALL_PREFIX and CMAKE_PREFIX_PATH are different things
that do different jobs (specify where to install vs where to search for
dependencies).

Mark

On Sun, Oct 9, 2016 at 12:20 PM Mahmood Naderan <mahmood.nt at gmail.com>
wrote:

> Hi mark,
> Thank you very much. In fact the following commands did the job
>
>
> $ cmake ..  -DCMAKE_C_COMPILER=/share/apps/computer/openmpi-2.0.1/bin/mpicc
> -DCMAKE_CXX_COMPILER=/share/apps/computer/openmpi-2.0.1/bin/mpic++
> -DCMAKE_PREFIX_PATH=/share/apps/chemistry/gromacs-5.1
> -DGMX_BUILD_OWN_FFTW=ON -DBUILD_SHARED_LIBS=off -DGMX_BUILD_MDRUN_ONLY=on
> $ make
> $ sudo make install
>
>
> However, after "sudo make install", the bin/mdrun goes in to
> /usr/local/gromacs and not what I specified in the PREFIX_PATH.
>
>
> I am not a user of gromacs. But as a cluster admin, I installed gromacs for
> the users.
>
> Thanks a lot.
>
>
> Regards,
> Mahmood
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