[gmx-users] 'TYS' residue not found

[Justin Lemkul]

On 9/2/16 1:40 PM, LAXMAN KUMAR wrote:
> hello users,
> I have done a pdb2gmx of a protein using force field "OPLSAA".
>
> COMMAND:
> gmx pdb2gmx -f A61V_CCR3.pdb -o A61V_processed.gro -ff oplsaa -water spce
>
> Here is the error:
> Fatal error:
> Residue 'TYS' not found in residue topology database
>

http://www.gromacs.org/Documentation/Errors#Residue_'XXX'_not_found_in_residue_topology_database

-Justin

-- 
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Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalemkul at outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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