[gmx-users] do_dssp version error
Samith Rathnayake
samithzzz1 at gmail.com
Mon Sep 12 14:31:07 CEST 2016
Dear all
When i'm run the do_dssp command in the gromacs
do_dssp -f ../run01/run01.trr -s ../run01/run01.tpr -sc scount.xvg -o
ss.xpm -dt 10 -ver 2
i got this error
There are 455 residues in your selected group
dssp cmd='/usr/local/bin/dssp -i dd5J9xcr -o ddPd7b8G > /dev/null 2>
/dev/null'
trn version: GMX_trn_file (single precision)
Reading frame 0 time 0.000
Back Off! I just backed up dd5J9xcr to ./#dd5J9xcr.1#
-------------------------------------------------------
Program do_dssp, VERSION 4.6.5
Source code file: /home/samith/gromacs-4.6.5/src/tools/gmx_do_dssp.c, line:
669
Fatal error:
Failed to execute command: Try specifying your dssp version with the -ver
option.
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
thank you
regards
samith
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