[gmx-users] error at nvt equilibrium

[Mohammad Zahidul Hossain Khan]

Dear Sir

I am getting the error when I try for *gmx mdrun -deffnm nvt. *
I have attached my nvt.mdp. Can anyone help me about it

Double sids (1547, 1548) for atom 4837
Double sids (1547, 1548) for atom 4838
Double sids (1547, 1548) for atom 4839
Double sids (1547, 1548) for atom 4840
Double sids (1547, 1548) for atom 4841
Double sids (1547, 1548) for atom 4842
Double sids (1547, 1548) for atom 4843
Double sids (1547, 1548) for atom 4844
Double sids (1547, 1548) for atom 4845
Double sids (1547, 1548) for atom 4846
Double sids (1547, 1548) for atom 4847
Double sids (1547, 1548) for atom 4848
Double sids (1547, 1548) for atom 4849

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Program gmx mdrun, VERSION 5.1.2
Source code file:
/build/gromacs-z6bPBg/gromacs-5.1.2/src/gromacs/topology/invblock.c, line:
98

Fatal error:
Double entries in block structure. Item 3963 is in blocks 1548 and 1547
 Cannot make an unambiguous inverse block



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*Mohammad Zahidul Hossain Khan Graduate student**Department of Physics*
*Email: khan5121 at vandals.uidaho.edu <khan5121 at vandals.uidaho.edu>*
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