[gmx-users] MM/PBSA

Amir Zeb zebamir85 at gmail.com
Wed Aug 9 06:22:36 CEST 2017

can you please paste your command line here?
we can judge where you are wrong

On Aug 9, 2017 12:50 PM, "Kingsley Theras Primus Dass ." <
105726107 at gms.tcu.edu.tw> wrote:

Hi everyone,

I am trying to calculate the binding free energy between protein and ligand
by using MM/PBSA. I included all the .itp files.  But when run the command,
am getting an error saying "NO XTC" Could someone help me, what would be
wrong, why such error occurs. i have pasted the error message below.

Thank you!

Select a group:
Program trjconv_mpi, VERSION 4.5.5
Source code file: trxio.c, line: 832

Fatal error:

For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors

"You Could Make More Money As a Butcher" (F. Zappa)

Select group for least squares fit
Selected 27: 'complex'
Select group for centering
Selected 27: 'complex'
Select group for output
Selected 27: 'complex'
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