[gmx-users] Compiling DSSP-2.2.1 from source

João Henriques joao.m.a.henriques at gmail.com
Wed Aug 16 13:42:50 CEST 2017

Ok, I found the problem. I had forgotten to remove "-static" from the
makefile. My bad, sorry.


On Wed, Aug 16, 2017 at 1:09 PM, João Henriques <
joao.m.a.henriques at gmail.com> wrote:

> Dear users and developers,
> I have compiled DSSP from source a bunch of times in the past, but I
> stopped being able to do it recently.
> I've set the make.config file appropriately, since my boost (version
> 1.59.0_3) was installed through MacPorts:
> BOOST_LIB_DIR    = /opt/local/lib
> BOOST_INC_DIR    = /opt/local/include
> However, upon hitting "make" I get a lot of boost related warnings, which
> culminate in the following error:
> linking mkdssp
> clang: warning: argument unused during compilation: '-pthread'
> [-Wunused-command-line-argument]
> ld: library not found for -lcrt0.o
> clang: error: linker command failed with exit code 1 (use -v to see
> invocation)
> make: *** [mkdssp] Error 1
> I googled a bit and found nothing particularly useful. Has anyone seen
> this before and/or have any idea of what's going on?
> I'm trying to install this on a Mac laptop with all software up to date,
> be it Xcode, MacPorts, etc. My g++ version is: Apple LLVM version 8.1.0
> (clang-802.0.42)
> Thank you for your attention,
> Best regards,
> João

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