[gmx-users] Gromacs enquiry

Subhomoi Borkotoky subhomoy.bk at gmail.com
Thu Aug 17 11:57:31 CEST 2017


You can try the following tutorial:

On Wed, Aug 16, 2017 at 9:48 PM, Odame Agyapong <oagyapomg at gmail.com> wrote:

> My name is Odame and I am currently working on a project that requires
> molecular dynamics. I plan using GROMACS for my simulations.
> Specifically I would like to simulate a membrane protein in POPC, TFE,
> DPC and DHPC lipid layers.
> First, how do I build or obtain these lipid bilayers. Is there a
> software or online resource I can go to obtain them or gromacs package
> provides these lipids?
> Initially i tried a POPC simulation in GROMACS and was getting errors
> in topology outputs. I was therefore unable to continue to the next
> steps .Is there a tutorial specifically for simulating in these
> --
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Yours Sincerely,
Centre for Bioinformatics
Pondicherry University

Alternate Email: subhomoi at bicpu.edu.in <subhomoi at mails.bicpu.edu.in>


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