[gmx-users] Bug?! Lost particles while sorting

Mohsen Ramezanpour ramezanpour.mohsen at gmail.com
Wed Aug 30 19:33:54 CEST 2017

Dear Gromacs users,

I am running simulations using Gromacs version 2016.3 while using GPU.

I get an error in my simulations as follows:

Program:     gmx mdrun, version 2016.3
Source file: src/gromacs/mdlib/nbnxn_grid.cpp (line 404)
MPI rank:    15 (out of 16)

Software inconsistency error:
Lost particles while sorting

For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors

Googling the error I found that there were relevant bugs before (discussed
by Dr. Berk Hess):



However, they should have been fixed in the newer versions as mentioned in
the above links.

Can someone please let me know what the problem could be in this case?

Many thanks in advance,

*Rewards work better than punishment ...*

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