[gmx-users] Radial distribution function for larger distances

Subashini .K subashinik at hotmail.com
Wed Feb 8 06:09:08 CET 2017


Hi Gromacs users,


How to calculate RDF for larger distances, say 15 angstrom using the following code. In which line should we focus to make changes?


Can someone help?


integrator               = md
dt                       = 0.002     ; 2 fs
nsteps                   = 5000000   ; 10.0 ns

nstenergy                = 5000
nstlog                   = 5000
nstxout-compressed       = 2000

continuation             = yes
constraint-algorithm     = lincs
constraints              = h-bonds

cutoff-scheme            = Verlet

coulombtype              = PME
rcoulomb                 = 1.0

vdwtype                  = Cut-off
rvdw                     = 1.0
DispCorr                 = EnerPres

tcoupl                   = Nose-Hoover
tc-grps                  = System
tau-t                    = 2.0
ref-t                    = 298.15
nhchainlength            = 1

pcoupl                   = Parrinello-Rahman
tau_p                    = 2.0
compressibility          = 4.46e-5
ref_p                    = 1.0

Thanks,
Subashini.K



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