[gmx-users] Question regarding equilibration of the system

Mohsen Ramezanpour ramezanpour.mohsen at gmail.com
Fri Feb 10 00:42:54 CET 2017


Hi Ali,

There are several parameters to check. It is, however, highly
dependent to the system.
Please describe your system, is it a protein-ligand system, a lipid
bilayer, ... ?

For lipid bilayers, the box size, and consequently, the are per lipid is a
good one to check for.

Cheers

On Thu, Feb 9, 2017 at 4:12 PM, <ali.khourshaei71 at student.sharif.edu> wrote:

> Dear Gromacs users,
>
> Is there any criteria I can guarantee that system has reached its
> equilibrium state?
>
> Eagerly looking forward to hear back from you.
>
> Sincerely,
>
> Ali
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