[gmx-users] Plumed with GROMACS 5.1.2

jkrieger at mrc-lmb.cam.ac.uk jkrieger at mrc-lmb.cam.ac.uk
Fri Feb 10 13:34:11 CET 2017

Hi Amit,

You patch plumed onto the gromacs source and then yes you need to
recompile gromacs. It may help to look at this thread from the plumed
google group
https://groups.google.com/forum/#!topic/plumed-users/stlK9-kaa6A where I
worked out how to do it. I was using plumed 2.1 which had some problems
that should be fixed in 2.3 I think so you definitely don't need to add
the -fPIC flag and probably don't need to remove the duplicate reference
to Plumed.o

Best wishes

> Hello,
> I have installed plumed 2.3. But I am having doubt in the patching
> process.
> Where should I patch the executable? Do I need to recompile gromacs after
> patching ?
> Thanks
> Amit Behera
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