[gmx-users] Error select a group gmx_density
Poncho Arvayo Zatarain
poncho_8629 at hotmail.com
Wed Feb 15 16:55:18 CET 2017
Hello Gromacs users: I´m trying to obtain the density og a mixed membrane plus a protein. I use the command line: gmx_gpu density -ng 4 -f npt.xtc -s npt.tpr -o density.xvg. And this appears:
Reading file npt.tpr, VERSION 5.0.4 (single precision)
Select 4 groups to calculate density for:
Group 0 ( System) has 58780 elements
Group 1 ( Other) has 58780 elements
Group 2 ( PROTEIN) has 576 elements
Group 3 ( DPPC) has 16640 elements
Group 4 ( DPPE) has 15488 elements
Group 5 ( TIP3) has 26076 elements
Select a group: 3 & 4 & 2 & 5
Selected 3: 'DPPC'
Select a group: Error: No such group '&'
Select a group: Selected 4: 'DPPE'
Select a group: Error: No such group '&'
Select a group: Selected 2: 'PROTEIN'
Select a group: Error: No such group '&'
Select a group: Selected 5: 'TIP3'
Last frame 5000 time 210000.000
Read 5001 frames from trajectory. Calculating density
Is there anything wrong with the command line or with Select a group: Error: No such group '&'? Also i tried with 3 | 4 | | 2 | 5 and appears the same error but with | instead &? What about the Last frame 5000 time 210000.000? Why 5000 and not 210000.000?. Also, and .xvg file is generated
Thanks
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