[gmx-users] deformation in simulation

RAHUL SURESH drrahulsuresh at gmail.com
Thu Feb 23 07:53:24 CET 2017

Simulating a protein with 100residues for 200ns doesn't show any stability.
There are some deformation(long-bonds) in the structure throughout the
process. Why is that so? Can I choose any stable structure in between these
200ns, for example say 176ns. Or is there any other way to make them work
good.I need your valuable suggestions

*Rahul Suresh*
*Research Scholar*
*Bharathiar University*

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