[gmx-users] Fwd: Regarding gromacs

Dilip H N cy16f01.dilip at nitk.edu.in
Thu Jan 12 10:07:25 CET 2017


---------- Forwarded message ----------
From: Dilip H N <cy16f01.dilip at nitk.edu.in>
Date: Thu, Jan 12, 2017 at 11:40 AM
Subject: Re: Regarding gromacs
To: Mark Abraham <mark.j.abraham at gmail.com>


Hello ,

While creating the topology fie from the perl interpreter, the topology
file is created and a file selection_atoms_raw file is also created..??
hw is this possible..?? hope that is wrong.....



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On Tue, Jan 10, 2017 at 3:36 PM, Mark Abraham <mark.j.abraham at gmail.com>
wrote:

> https://mailman-1.sys.kth.se/pipermail/gromacs.org_gmx-users
> /2017-January/110246.html
>
> On Tue, Jan 10, 2017 at 10:50 AM Dilip H N <cy16f01.dilip at nitk.edu.in>
> wrote:
>
>> sorry ...but i am not able to get it..??
>>
>>
>>
>>
>>  Sent with Mailtrack
>> <https://mailtrack.io/install?source=signature&lang=en&referral=cy16f01.dilip@nitk.edu.in&idSignature=22>
>>
>> On Tue, Jan 10, 2017 at 2:17 PM, Mark Abraham <mark.j.abraham at gmail.com>
>> wrote:
>>
>> Hi,
>>
>> Please do not email individuals to ask the same questions they've already
>> answered on the list. Justin already sketched a procedure for you.
>>
>> Mark
>>
>> On Tue, 10 Jan 2017 04:34 Dilip H N <cy16f01.dilip at nitk.edu.in> wrote:
>>
>> Can u kindly guide me sir plzz.....
>>
>>
>>
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>>
>> On Tue, Jan 10, 2017 at 9:02 AM, Dilip H N <cy16f01.dilip at nitk.edu.in>
>> wrote:
>>
>> Sir, i am a 1st sem Ph.D student.. and this is a new field for me..so hw
>> can i proceed..??
>> I want to simulate 300 molecules of ammonia.. and run the simulation...
>> 1] hw can i create 300 molecules of ammonia..??
>> 2] which command can i run..from there..??
>>
>> --
>> With Best Regards,
>>
>> DILIP.H.N
>> Ph.D Student,
>> Research Scholar,
>> Department of Chemistry,
>> National Institute of Technology-Karnataka,
>> Surathkal, Mangaluru - 575025.
>>
>>
>>
>>  Sent with Mailtrack
>> <https://mailtrack.io/install?source=signature&lang=en&referral=cy16f01.dilip@nitk.edu.in&idSignature=22>
>>
>>
>>
>>
>> --
>> With Best Regards,
>>
>> DILIP.H.N
>> Ph.D Student,
>> Research Scholar,
>> Department of Chemistry,
>> National Institute of Technology-Karnataka,
>> Surathkal, Mangaluru - 575025.
>>
>>
>>
>>
>> --
>> With Best Regards,
>>
>> DILIP.H.N
>> Ph.D Student,
>> Research Scholar,
>> Department of Chemistry,
>> National Institute of Technology-Karnataka,
>> Surathkal, Mangaluru - 575025.
>>
>


-- 
With Best Regards,

DILIP.H.N
Ph.D Student,
Research Scholar,
Department of Chemistry,
National Institute of Technology-Karnataka,
Surathkal, Mangaluru - 575025.



-- 
With Best Regards,

DILIP.H.N
Ph.D Student,
Research Scholar,
Department of Chemistry,
National Institute of Technology-Karnataka,
Surathkal, Mangaluru - 575025.



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