[gmx-users] g_membed in 5.1.4?

Albert mailmd2011 at gmail.com
Sun Jan 29 11:32:30 CET 2017

Unfortunately I didn't find anything about what's  ".dat"  should be, 
what's the format.

The option -membed does what used to be g_membed, i.e. embed a protein 
into a membrane. This module requires a number of settings that are 
provided in a data file that is the argument of this option. For more 
details in membrane embedding, see the documentation in the user guide. 
The options -mn and -mp are used to provide the index and topology files 
used for the embedding.

won't it be more clear just give the users an example?

On 01/29/2017 11:29 AM, David van der Spoel wrote:
> This 
> http://manual.gromacs.org/documentation/5.1.1/onlinehelp/gmx-mdrun.html 
> tells you to read the manual.

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