[gmx-users] Linker error during GMX make

[Clemens Grimm]

Dear All,

I am doing a

cmake . -DGMX_GPU=ON -DGMX_MPI=ON -DCMAKE_INSTALL_PREFIX=/soft  
-DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda DBUILD_SHARED_LIBS=OFF
make

to build gromacs-5.1.4 with openmpi and cuda. After compiling fine, I  
get the following linker error:

/usr/lib/openmpi/lib/libmpi.so: error adding symbols: File in wrong format

My system is CentOS 7 (centos-release-7-3.1611.el7.centos.x86_64), I  
have installed openmpi from the CentOS repository.

Thanks for your help,
Clemens


--------------------------------------------------
Dr. Clemens Grimm
Institut für Biochemie
Biozentrum der Universität Würzburg
Am Hubland
D-97074 Würzburg
Germany
e-mail: Clemens.Grimm at biozentrum.uni-wuerzburg.de
phone : +49 0931 31 84031
-------------------------------------------------


--------------------------------------------------
Dr. Clemens Grimm
Institut für Biochemie
Biozentrum der Universität Würzburg
Am Hubland
D-97074 Würzburg
Germany
e-mail: Clemens.Grimm at biozentrum.uni-wuerzburg.de
phone : +49 0931 31 84031
-------------------------------------------------


--------------------------------------------------
Dr. Clemens Grimm
Institut für Biochemie
Biozentrum der Universität Würzburg
Am Hubland
D-97074 Würzburg
Germany
e-mail: Clemens.Grimm at biozentrum.uni-wuerzburg.de
phone : +49 0931 31 84031
-------------------------------------------------