[gmx-users] Help on MD performance, GPU has less load than CPU.

Mark Abraham mark.j.abraham at gmail.com
Thu Jul 13 19:54:10 CEST 2017


So the state of the art in the whole field is to just blindly copy .mdp
settings from webpages rather than review the literature of related work?
Nice. :-D

Mark

On Thu, Jul 13, 2017 at 7:18 PM Téletchéa Stéphane <
stephane.teletchea at univ-nantes.fr> wrote:

> Le 12/07/2017 à 18:15, Mark Abraham a écrit :
> > Hi,
> >
> > Sure. But who has data that shows that e.g. a free-energy calculation
> with
> > the defaults produces lower quality observables than you get with the
> > defaults?
> >
> > Mark
>
> Hi,
>
> As defaults are defaults ... who knows :-) To get number in front of
> these assumptions is hard, and probably nobody wants to do this on a
> large scale ... But I'm too close to holidays to argue on this point by
> now!
>
> Stéphane
>
> --
> Assistant Professor in BioInformatics, UFIP, UMR 6286 CNRS, Team Protein
> Design In Silico
> UFR Sciences et Techniques, 2, rue de la Houssinière, Bât. 25, 44322
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