[gmx-users] Performance values
Maureen Chew
maureen.chew at oracle.com
Thu Jul 27 16:15:37 CEST 2017
Where is it documented how the mdrun performance metrics are calculated ? I’ve
looked here
http://manual.gromacs.org/documentation/2016/user-guide/mdrun-performance.html <http://manual.gromacs.org/documentation/2016/user-guide/mdrun-performance.html>
and here
http://manual.gromacs.org/documentation/2016.3/manual-2016.3.pdf <http://manual.gromacs.org/documentation/2016.3/manual-2016.3.pdf>
but seem to have missed explanation.
Are the sample mdrun times below user time or real time? Generally, wall is real time
I understand that “Performance:” is not a linear scale but what is the scale
in the 2016.3 sample below?
Core t (s) Wall t (s) (%)
Time: 69761.050 272.504 25600.0
(ns/day) (hour/ns)
Performance: 3.964 6.054
TIA
—maureen
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