[gmx-users] RemvingDummyAtoms

[Mark Abraham]

Hi,

gmx trjconv can apply a selection (e.g. generated with gmx select) to your
trajectory frames. gmx convert-tpr can do the same to your tpr, which you
might need to help analysis work later on.

Mark

On Thu, Jun 29, 2017 at 10:57 PM Mostafa Javaheri <
javaheri.gromacs at gmail.com> wrote:

> Dear gmx users
>
> I really appreciate it if anyone could tell me how could I remove dummy
> atoms from my trajectory? I made them before running the simulation for
> adding repulsive potential and now for analyzing the results there is no
> need for them.
>
> Regards
>
> M.Javaheri
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