[gmx-users] xtc with perl

Mark Abraham mark.j.abraham at gmail.com
Fri Jun 30 13:52:25 CEST 2017


Hi,

I suggest using python projects like mdanalysis or cpptraj, which read xtc
files, or using the GROMACS C++ analysis tools template, rather than
wasting time writing your own code to read them. If you really must, then
you should wrap this library
http://www.gromacs.org/Developer_Zone/Programming_Guide/XTC_Library.

Mark

On Fri, Jun 30, 2017 at 1:30 PM gromacs query <gromacsquery at gmail.com>
wrote:

> Hi all,
>
> I would like my perl script to analyse xtc trajectory file directly instead
> of analysing human readable extracted frame files (pdb/gro etc.) to save
> disk space. I could not find much on mailing list but there was a brief
> reference about using Swig which I could not understand how to start with
> it.
>
> Any help or suggestion is much appreciated to start with.
>
> Thanks
> Jiom
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