[gmx-users] Is dssp required with CG ElNeDyn model?

Sudip Das das.sudip37 at gmail.com
Sun May 7 14:03:33 CEST 2017

Dear All,

I am trying to set up a system containing protein in water
using coarse-grained ElNeDyn model in GROMACS. As this model itself
considers a global elastic network between the backbone beads to conserve
the conformation, *is it necessary to use -dssp option* while generating CG
structure and topolgy for the protein using martinize.py script?

Thanks in advance...


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