[gmx-users] Is dssp required with CG ElNeDyn model?

[Sudip Das]

Dear All,

I am trying to set up a system containing protein in water
using coarse-grained ElNeDyn model in GROMACS. As this model itself
considers a global elastic network between the backbone beads to conserve
the conformation, *is it necessary to use -dssp option* while generating CG
structure and topolgy for the protein using martinize.py script?

Thanks in advance...

Regards,
Sudip