[gmx-users] Error with moleculetype
Pandya, Akash
akash.pandya.15 at ucl.ac.uk
Fri May 19 18:49:13 CEST 2017
Hi all,
I have received an error message shown below.
Fatal error:
No line with moleculetype 'SOL' found the [ molecules ] section of file
'topol.top'
For more information and tips for troubleshooting, please check the GROMACS
website at http://www.gromacs.org/Documentation/Errors
I don't understand what's wrong with my topol.top file. I have included the following before the [ molecules ] section.
[ moleculetype ]
; Name
SOL 1
My [ molecules ] section looks like this:
[ molecules ]
; Compound #mols
Protein_chain_H 1
SOL 73337
Citrate 29
GLY 984
I have read the documentation and still don't understand. Please can you advise me on what to do?
Many thanks,
Akash
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