[gmx-users] virtual site, dummy massive site

[Alex]

And the things that affect the motion of the things with LJ interactions. :)

Alex


On 11/18/2017 3:49 PM, Mark Abraham wrote:
> Hi,
>
> Only things with LJ interactions can influence the LJ energy.
>
> Mark
>
> On Fri, 17 Nov 2017 21:06 Faezeh Pousaneh <fpoosaneh at gmail.com> wrote:
>
>> I have 2 questions please. They seem evident, but I need to be sure to
>> solve my simulation problem:
>>
>> 1- Does being a virtual site (charge, no mass) or a normal atom, effects on
>> its LJ interaction energies with rest of system?
>>
>> 2-  Does adding a dummy massive site (no charge, only mass) to atoms of
>> mono-atomic system, influences on the LJ energy of whole system?
>>
>> Best regards
>> --
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