[gmx-users] How to extend the protein simulation in Gromacs from 1 ns to 150 ns?
Rahma Dahmani
rahma.dahmani at fst.utm.tn
Thu Oct 12 17:24:53 CEST 2017
Hi,
i am a beginner with Gromacs and i have run the simulation using Gromacs
forcefield for 1000 ps* (1ns)* . Now I want to extend it to *150 ns*. How
should I proceed?
should i change the md.mdp file ?? actually i am using the defaul mdp file
in gromacs tutorial :
integrator = md ; leap-frog integrator
nsteps = 500000 ; 2 * 500000 = 1000 ps, 1 ns
dt = 0.002 ; 2 f
so what should i change exactly??
can anyone help me please,
Thank you
--
*Rahma Dahmani Doctorante en CHIMIE Unité de Recherche: Physico-Chimie des
Matériaux à l'état condensé, Laboratoire de Chimie Théorique et
Spectroscopie MoléculaireUniversité de Tunis El Manar, Faculté des Sciences
de Tunis Campus Universitaire Farhat Hached - BP n ° 94 - Rommana 1068,
Tunisie Tél: (+216) 28151042*
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