[gmx-users] Contact map

Justin Lemkul jalemkul at vt.edu
Tue Oct 24 15:32:17 CEST 2017

On 10/24/17 7:58 AM, spss4 at iacs.res.in wrote:
> Hi all
> I want to generate a contact map for all the residues of lysozyme 
> protein.
> I am using gmx mdmat to generate this. Can I generate a text file (which
> can be open in Grace) except the image files(eg: xpm file)? Please let me
> know the particular flag which I can use to get a *.xvg file.

.xvg files are for time series. XmGrace will not plot matrix data.



Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry

303 Engel Hall
340 West Campus Dr.
Blacksburg, VA 24061

jalemkul at vt.edu | (540) 231-3129


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