[gmx-users] Contact map

Justin Lemkul jalemkul at vt.edu
Tue Oct 24 15:32:17 CEST 2017



On 10/24/17 7:58 AM, spss4 at iacs.res.in wrote:
> Hi all
> I want to generate a contact map for all the residues of lysozyme 
> protein.
> I am using gmx mdmat to generate this. Can I generate a text file (which
> can be open in Grace) except the image files(eg: xpm file)? Please let me
> know the particular flag which I can use to get a *.xvg file.
>

.xvg files are for time series. XmGrace will not plot matrix data.

-Justin

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Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry

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