[gmx-users] Simulation in NPgT ensemble

André Farias de Moura moura at ufscar.br
Mon Sep 25 17:15:20 CEST 2017


it is quite well explained in the manual, pcoupltype=surface-tension
Andre

On Mon, Sep 25, 2017 at 5:38 AM, Own 12121325 <own12121325 at gmail.com> wrote:

> Dear Gromacs users!
>
> I wonder to ask whether is possible to perform simulations in NPgT ensemble
> with the explicit definition of the surface tension value. My system is
> composed of the lipid bilayer solvated in water.
>
> I have found that switching compressibility along x-y to zero and
> introducing bigger negative ref_p along this direction will produce lateral
> tension on the bilayer according to
>
> g =b*(Pz – Py), where b - is the averaged height of the simulation box
>
>
> I wonder to ask if it also can be realized instead via introduction of some
> gamma_tension constant as a scaling factor ?
>
>
> Thanks you!
>
>
> Gleb
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-- 
_____________

Prof. Dr. André Farias de Moura
Department of Chemistry
Federal University of São Carlos
São Carlos - Brazil
phone: +55-16-3351-8090


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