[gmx-users] Calculate RDF within a certain distance from atom

Dilip H N cy16f01.dilip at nitk.edu.in
Tue Feb 20 17:53:45 CET 2018


Hello,
How to get RDF within a certain distance..??

Say for eg., i have glycine amino-acid and i want the RDF of Oxygen water
atoms within 0.7nm of C-alpha (Calpha-Ow).

how can i get it from in-house gmx rdf command...??

Any suggestions are appreciated...

Thank you.


-- 
With Best Regards,

DILIP.H.N
Ph.D. Student



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