[gmx-users] (no subject)

Soham Sarkar soham9038 at gmail.com
Sun Jul 22 14:01:37 CEST 2018


No I didn't try it. Its a nice idea.. I will try it.

On Sun, Jul 22, 2018 at 3:28 AM <pbuscemi at q.com> wrote:

> Have you tried the  "insert-chemicals-after-md" command ?
>
> PB
>
> > On Jul 11, 2018, at 4:50 AM, Mark Abraham <mark.j.abraham at gmail.com>
> wrote:
> >
> > Hi,
> >
> > Are you trying to observe something about the transition, or merely the
> > different end points?
> >
> > Mark
> >
> >> On Tue, Jul 10, 2018 at 4:12 PM Soham Sarkar <soham9038 at gmail.com>
> wrote:
> >>
> >> Dear all,
> >> I am planning to do a simulation where after 50ns of simulation I want
> to
> >> add some other chemicals in the system and continue it for another
> 50ns, so
> >> that I can have the effect of that chemicals exclusively before and
> after
> >> adding it to the system.Is it at all possible? If yes please tell me the
> >> protocol/ commands or give me some references where this type of
> simulation
> >> is used. Thanks in advance.
> >> -Soham
> >> --
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-- 
SOHAM SARKAR
Junior Research Fellow
Department of Chemistry
INDIAN INSTITUTE OF TECHNOLOGY BOMBAY


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