[gmx-users] Comm-mode

Justin Lemkul jalemkul at vt.edu
Sat Mar 10 18:25:40 CET 2018



On 3/10/18 12:17 PM, Amin Rouy wrote:
> Dear Gromacs people,
>
> I have a question please.
>
> In which condition we must use center of mass removal? Is that optional or
> necessary?

Typically necessary.

> and how to know which mode (linear or angular) is better for our
> simulations?

Linear is only for condensed-phase systems, angular is only for vacuum 
simulations.

-Justin

-- 
==================================================

Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry

303 Engel Hall
340 West Campus Dr.
Blacksburg, VA 24061

jalemkul at vt.edu | (540) 231-3129
http://www.biochem.vt.edu/people/faculty/JustinLemkul.html

==================================================



More information about the gromacs.org_gmx-users mailing list