[gmx-users] rdf calculation for wormlike micelles

Joe Jordan e.jjordan12 at gmail.com
Wed Mar 14 10:12:46 CET 2018

See here for info on the selection syntax

On Wed, Mar 14, 2018 at 10:01 AM, Esra Kaçar <esrakacar at iyte.edu.tr> wrote:

> Dear all,
> I am working on a wormlike micelle that has a curved structure. I want to
> calculate the radial distribution functions of constituent molecules with
> respect to the backbone (the line following the micelle length and
> represents the center of the curved cylindrical structure) of the wormlike
> micelle. Since the structure is curved, I couldn’t find out how to select
> the backbone as a reference point in g_rdf. I am using Gromacs v 5.1.  Any
> suggestions would be appreciated.
> Thanks,
> Esra
> --
> Gromacs Users mailing list
> * Please search the archive at http://www.gromacs.org/
> Support/Mailing_Lists/GMX-Users_List before posting!
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.

Joe Jordan

More information about the gromacs.org_gmx-users mailing list