[gmx-users] mdp options for Amber99sb-ildn
sl.heidari at gmail.com
Fri Mar 16 16:28:29 CET 2018
Dear Gromacs Users
I am trying to run a molecular dynamics simulation of DNA by amber99sb-ildn
forcefield. The topology has been generated successfully, the solvent and
ions has been added.
I would like to know how to determine the mdp file options in minimization
and equilibration step for the Amber forcefield. Should I change these
options from the defaults of the tutorial according to my forcefield?
More information about the gromacs.org_gmx-users