[gmx-users] Peptide simulation on the membrane surface

[Mijiddorj B]

Dear gmx users,

Currently, I performed 200 ns simulation of peptide on the membrane
surface. The peptide placed 3.5 nm from the top leaflet The peptide has not
yet attached to the membrane surface. The peptide may interact with both
side of the membrane surface through the periodic boundary. If possible,
please discuss me about the reliability of the simulation.

Best regards,
Miji