[gmx-users] Population Density Plot

[Vytautas Rakeviius]

 Also you can use R for that task. Very easy like:density(x, ...)

    On Monday, September 17, 2018, 4:26:38 PM GMT+3, João Henriques <joao.m.a.henriques at gmail.com> wrote:  
 
 How does that reply the OP's question? To calculate the joint probability
distribution you need to perform a kernel density estimation. I'd recommend
either SciPy or Seaborn if you're not averse to coding in Python:

https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.gaussian_kde.html
https://seaborn.pydata.org/examples/joint_kde.html

With Seaborn this is an incredibly simple task.

J
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