[gmx-users] secondary structure analysis

SHAHEE ISLAM islamshahee at gmail.com
Mon Sep 24 13:36:51 CEST 2018

i am doing martini based coarsed coarse grained simulation in
gromacs.after getting the coarse grained structure ,i can convert cg
pdb it to the gro file.using vmd, seondary structure can be
analysed.can any one suggest what may be the best way to calculate the
secondary structure change of protein.
thanking you

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