[gmx-users] question about make_ndx
carlos.navarro87 at gmail.com
Thu Apr 4 17:55:30 CEST 2019
Dear gmx users,
I’m trying to feed make_ndx though echo, but I’m having some issues.
When I use echo "r 1" | gmx make_ndx -f struc.gro -o test.ndx I got the
following error message:
Error reading user input
So apparently I have to include also the q argument to close properly
make_ndx, but I don’t know how to do this.
I have tried with echo "r 1 q" | gmx make_ndx, echo "r 1” “q" | gmx
make_ndx, and other combinations, but non of them worked.
Carlos Navarro Retamal
Bioinformatic Engineering. PhD.
Postdoctoral Researcher in Center of Bioinformatics and Molecular
Universidad de Talca
Av. Lircay S/N, Talca, Chile
E: carlos.navarro87 at gmail.com or cnavarro at utalca.cl
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