[gmx-users] gromacs instillation

Ali Ahmed aa5635737 at gmail.com
Thu Apr 11 22:37:49 CEST 2019


Yes I'm using the quick and dirty Installation

On Thu, Apr 11, 2019 at 12:55 PM RAHUL SURESH <drrahulsuresh at gmail.com>
wrote:

> Are you following the quick and dirty Installation or modify your
> compilation?
>
> On Thu 11 Apr, 2019, 11:20 PM RAHUL SURESH, <drrahulsuresh at gmail.com>
> wrote:
>
> >
> >
> > On Thu 11 Apr, 2019, 11:15 PM Ali Ahmed, <aa5635737 at gmail.com> wrote:
> >
> >> I see gmx excutable in /usr/local/gromacs/bin/ and I see GMXRC. Yes,
> each
> >> terminal I run source /usr/local/gromacs/bin/GMXRC to strat using
> gromacs.
> >> I kind of confused which one I should modify
> >>
> >
> > If that is your executable directory, then there is nothing to modify.
> > What error actually you get?
> >
> > Please try the command gmx_mpi after source command. (A wild guess)
> >
> > Thank you
> >
> >
> >
> >>
> >> On Thu, Apr 11, 2019 at 10:08 AM p buscemi <pbuscemi at q.com> wrote:
> >>
> >> > when you open a new terminal you need to run " source" again, but you
> >> > probably know this by now
> >> > or
> >> > add the path to your /etc/.profile to make the change permanent
> >> >
> >> > Sent from Mailspring (
> >> >
> >>
> https://link.getmailspring.com/link/1554995165.local-f06b1bee-57af-v1.5.3-420ce003@getmailspring.com/0?redirect=https%3A%2F%2Fgetmailspring.com%2F&recipient=Z214LXVzZXJzQGdyb21hY3Mub3Jn
> >> ),
> >> > the best free email app for work
> >> > On Apr 11 2019, at 1:45 am, Mark Abraham <mark.j.abraham at gmail.com>
> >> wrote:
> >> > > Hi,
> >> > >
> >> > > Each shell you open needs to be told how to find GROMACS, per
> >> > >
> >> >
> >>
> http://manual.gromacs.org/documentation/current/install-guide/index.html#getting-access-to-gromacs-after-installation
> >> > >
> >> > > Mark
> >> > > On Thu., 11 Apr. 2019, 05:09 Ali Ahmed, <aa5635737 at gmail.com>
> wrote:
> >> > > > Hello GMX users
> >> > > > I have installed gromacs 2019.1 on Ubuntu 16.04 and everything was
> >> > well.
> >> > > > I run: source /usr/local/gromacs/bin/GMXRC and checked the
> version,
> >> it
> >> > was
> >> > > > 2019.1.
> >> > > > When I open a new terminal and hit gmx, it says gromacs is
> currently
> >> > not
> >> > > > installed. You can install it by typing: sudo apt install gromacs.
> >> > When I
> >> > > > did it, the version became 5.1.2.
> >> > > >
> >> > > > Any idea how to solve it!
> >> > > > Thank you
> >> > > > Ali
> >> > > > --
> >> > > > Gromacs Users mailing list
> >> > > >
> >> > > > * Please search the archive at
> >> > > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List
> before
> >> > > > posting!
> >> > > >
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> >> > > > * For (un)subscribe requests visit
> >> > > >
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> >> or
> >> > > > send a mail to gmx-users-request at gromacs.org.
> >> > > >
> >> > > --
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> >> > >
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> >> > >
> >> >
> >> > --
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> >> >
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> >> >
> >> --
> >> Gromacs Users mailing list
> >>
> >> * Please search the archive at
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> >> posting!
> >>
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> >>
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> >>
> >
> --
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