[gmx-users] increase membrane dimensions

edesantis edesantis at roma2.infn.it
Tue Apr 23 10:03:54 CEST 2019

thank you John for your help,

I solved using gmx genconf and the KALP15 tutorial,

charm gui also worked, but I preferred to use gromos ff


On 2019-04-16 17:48, John Whittaker wrote:
> Sorry for the double post, but you could also try using CHARMM-GUI.
> http://www.charmm-gui.org/
> That way you don't have to deal with implementing the Berger lipids 
> into
> the gromos force field (note that CHARMM is all-atom while gromos is
> united-atom). I have only used it to make a pure lipid bilayer, though, 
> so
> I'm not sure how easy it is to use to embed a protein in a membrane.
> The program also generates necessary GROMACS input files for you if you
> choose.
> - John

Dr. Emiliano De Santis, PhD

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