[gmx-users] inputfile character related issue

asha choudhury ashachoudhury95 at gmail.com
Mon Aug 5 15:13:02 CEST 2019


Dear users,
          I want to simulate a normal protein-water system by using gromacs
tutorial. when i run this command, gmx pdb2gmx -f inputfile.pdb -o
outputfile.gro , i get this error ; An input file contains a line longer
than 4096 characters, while the buffer passed to fgets2 has size 4096. The
line starts with: '   . Here i select the opls  folder from working
directory and TIP4P as water system.
              I would be appreciated if anyone can help me with this.


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