[gmx-users] Potential Energy Distribution Plots in REMD

Shan Jayasinghe shanjayasinghe2011 at gmail.com
Sat Aug 10 04:15:01 CEST 2019


Dear Gromacs Users,

I want to plot potential energy distribution plot using the normal
distribution curve (bell curve) for all replicas in my REMD simulation. I
used the command,

gmx analyze -f Penergy.xvg -dist -normalize

However, I got a histogram, instead of a bell curve.
Appreciate, if you could help me to get the normalised curve for potential
energy distribution.

Thank you.





-- 
Best Regards
Shan Jayasinghe


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