[gmx-users] topology files for lipid bilayer

Bratin Kumar Das 177cy500.bratin at nitk.edu.in
Wed Aug 14 13:18:52 CEST 2019


Hi...you can use charmm gui...for generating the topology for a lipid by
layers.. it's much easier way to do...

On Wed 14 Aug, 2019, 12:28 PM Atila Petrosian, <atila.petrosian at gmail.com>
wrote:

> Dear gromacs users,
>
> I want to do MD simulation of the lipid bilayer-ligand system.
> I used MD topology file from Automated Topology Builder (ATB). ATB got
> GROMACS G54A7FF United-Atom (ITP file) for ligand molecule.
> How to get appropriate topology files for lipid bilayer?
>
> Please guide me about that.
>
> Best,
> Atila
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