[gmx-users] SASA calculation

[Bratin Kumar Das]

You can put the residue of your interest inside a .ndx file..Use the .ndx
file when you are running sasa command

On Wed 21 Aug, 2019, 11:25 PM Pandya, Akash, <akash.pandya.15 at ucl.ac.uk>
wrote:

> Hi all,
>
> I calculated the SASA for my protein and I got the average area per
> residue. I was wondering if there was a criteria to determine whether a
> residue is exposed or buried based on an individual's SASA? Or is it
> arbitrary? Apologies if I'm being naive, it's just that I've never actually
> used this calculation before. Thank you for your help.
>
> Best wishes,
>
> Akash
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