[gmx-users] Mutant_md_1ns.log, WT_md_1ns.log + 1 more item
Lei Qian (via Google Drive)
drive-shares-noreply at google.com
Wed Aug 28 16:52:16 CEST 2019
I've shared some items with you:
Mutant_md_1ns.log
https://drive.google.com/file/d/1qDoghj6Orc8yJTnLgvuhOERzMUfaH2Dd/view?usp=sharing&ts=5d66951d
WT_md_1ns.log
https://drive.google.com/file/d/1gSTOnEpIj6UcqnfuNS-TvOosQKJCWJsa/view?usp=sharing&ts=5d66951d
WT_md_10ns.log
https://drive.google.com/file/d/1UeLAcT4UZ6IpUKWJL7ahNRKmYmFt0Eeg/view?usp=sharing&ts=5d66951d
They're not attachments -- they're stored online. To open these items, just
click the links above.
Dear Users,
Sorry for this inconvenience.
Could I ask a question about Gromacs running time for my Wide Type and
mutant protein (only 1 residue mutant)? Thanks!
I attach the three log files here.
(1) WT protein running for 1ns production step.(wall time: 1hour 40min).
(2) WT protein running for 10ns production step (wall time: 6days 09h17).
(3) Mutant protein running for 1ns production step. (wall time: 17hours
30min).
From the log files, I can find each of them ran on one node with 24 cores.
It seems the wall times for (1) and (2) do not have linearly proportional
relationship. And (3) running took much longer time than I expected, since
mutant protein is only one residue mutant.
Thanks!
More information about the gromacs.org_gmx-users
mailing list