[gmx-users] calculate angle between two beeta sheet

[atanu das]

First define the two vectors e.g. select the c-alphas of residues 43 and 45 (vector1) and residues 51 and 53 (vector2). Then calculate the angle between the two vectors (possibly using the command g_sgangle). This will give you a time series of the angle between the two above-mentioned vectors.Atanu

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  On Mon, Jan 7, 2019 at 12:45 PM, SHAHEE ISLAM<islamshahee at gmail.com> wrote:   can anyone please help me in this regards.

On 1/4/19, SHAHEE ISLAM <islamshahee at gmail.com> wrote:
> hi,
> my protein contain three beeta sheet.
> (i) resid 43-45
> (ii) resid 51-53
> (iii) resid 58-59
> i want to calculate the angle between two beeta sheet.can any one
> please suggest me how i can do this.
> thanking you
> shahee
>
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