[gmx-users] ramachandran plot

Tamas Hegedus tamas at hegelab.org
Wed Jan 9 11:59:50 CET 2019


Hi,

I use the python MDAnalysis packages for this.

https://github.com/MDAnalysis/mdanalysis/issues/1335

https://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/dihedrals.html

Have a nice day, Tamas

On 01/09/2019 10:30 AM, zaved at tezu.ernet.in wrote:
> Dear Users
> 
> Can anyone suggest me any available tool to analyze ramachandran plot
> timewise for a trajectory?
> 
> Thank You
> 
> Regards
> Zaved Hazarika
> Research Scholar
> Dept. Of Molecular Biology and Biotechnology,
> Tezpur University,
> India
> 
> 
> 
> 
> 
> 
> 
> * * * D I S C L A I M E R * * *
> This e-mail may contain privileged information and is intended solely for the individual named. If you are not the named addressee you should not disseminate, distribute or copy this e-mail. Please notify the sender immediately by e-mail if you have received this e-mail in error and destroy it from your system. Though considerable effort has been made to deliver error free e-mail messages but it can not be guaranteed to be secure or error-free as information could be intercepted, corrupted, lost, destroyed, delayed, or may contain viruses. The recipient must verify the integrity of this e-mail message.
> 


-- 
Tamas Hegedus, PhD
Senior Research Fellow
Department of Biophysics and Radiation Biology
Semmelweis University     | phone: (36) 1-459 1500/60233
Tuzolto utca 37-47        | mailto:tamas at hegelab.org
Budapest, 1094, Hungary   | http://www.hegelab.org


More information about the gromacs.org_gmx-users mailing list