[gmx-users] POPC Berger lipids parameters for AMBER99sb

Justin Lemkul jalemkul at vt.edu
Wed Jul 10 03:21:04 CEST 2019



On 7/9/19 2:59 AM, Carlos Navarro wrote:
> Dear Justin,
> Thanks for the reply.
> I forgot to mention that indeed the reason of using Berger lipids is
> because there are united-atom. I'm planning on running computational
> electrophysiology simulations, and since my system is about 600k atoms I
> want to use vsites, as De Groot has been doing recently
> https://www.nature.com/articles/s41467-018-03179-y

The only source of parameters and coordinates that I know of:

http://wcm.ucalgary.ca/tieleman/downloads

-Justin

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Justin A. Lemkul, Ph.D.
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