[gmx-users] clustering of ions during NPT simulation

Netaly Khazanov netalyk at gmail.com
Thu Jun 27 14:44:37 CEST 2019

Hi All,
I perform simulation of a transmembrane protein in a membrane in 1M
concentration of NaCl.
During the simulation, I noticed that ions began to cluster and they are
not evenly spread after 10 ns. Is it a problem or I can proceed further?
Thanks in advance,


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