[gmx-users] how to change ps x axis format to ns in gyrate.xvg

Justin Lemkul jalemkul at vt.edu
Mon May 6 14:24:12 CEST 2019

On 5/5/19 10:20 AM, Ladan Mafakhe wrote:
> Hello
> I used below command gyrate to made gyrate.xvg  file
> gmx gyrate -s md_0_1.tpr -f md_0_1_noPBC.xtc -o gyrate.xvg
> The gyrate.xvg file was generated  ps time scale  but I want to  generate this curve on ns time scale . so I used below command butI I got an error that command not found.
> gmx gyrate -s md_0_1.tpr -f md_0_1_noPBC.xtc -o gyrate.xvg  -tu ns

gmx gyrate does not support the use of -tu. Just post-process the output 
by dividing all time values by 1000 using your favorite scripting language.



Justin A. Lemkul, Ph.D.
Assistant Professor
Office: 301 Fralin Hall
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Virginia Tech Department of Biochemistry
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jalemkul at vt.edu | (540) 231-3129


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