[gmx-users] gmx trjconv

[Alex]

Dear all,
Any comment on this, please?

Thank you.
Alexander

On Thu, May 23, 2019 at 10:02 AM Alex <alexanderwien2k at gmail.com> wrote:

> Dear GMX user,
> I have a 110 GB trajectory from which I would like to extract only the
> trajectory of the part of my interest, the rest is water. To do so, I use "
> echo 1 | mpiexec_mpt -n 1 gmx_mpi trjconv -f tot.xtc -s topol.tpr -o nonwater.skip4.xtc
> -skip 4". The extracting goes very slow unfortunately. I wonder if there
> is any other faster solution or suggestion to make it faster?
>
> Regards,
> Alexander
>