[gmx-users] clustered structures

[Quyen V. Vu]

the results in your output are all models after clustering, they are sorted
by the population.
check the other output of gmx cluster for more details like cluster size,
transition ...

On Fri, Nov 15, 2019 at 9:38 PM Shradheya R.R. Gupta <
shradheyagupta at gmail.com> wrote:

> Hi,
> After simulation I used gmx cluster which generated 20 structures in a
> single pdb file.Now  I am confused, what to do next. Take average of all
> the generated structures or use a single cluster.
>
> If to select average structure then how? If to select a single cluster then
> how?
>
> Thank you
> Shradheya Gupta
> DBT-BIF, University of Rajasthan
> --
> Gromacs Users mailing list
>
> * Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
> posting!
>
> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
> * For (un)subscribe requests visit
> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
> send a mail to gmx-users-request at gromacs.org.
>