[gmx-users] pdb2gmx , or equivalent

[Ling Chan]

I see, thank you Justin. Suppose you mean ASP vs ASH, HID, HIE, HIP, etc.?

But how about disulfide bridges? Does pdb2gmx respect SSBOND and / or CONECT records in the PDB? Perhaps it will re-evaluate them regardless?

Also, I see on the pdb2gmx manual page that the default glutamine is charged. What does it mean?

Thank you.

Ling



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